Transcript: lnc-CLIC1-2:1

Basic information

LNCipedia transcript ID: lnc-CLIC1-2:1 
LNCipedia gene ID: lnc-CLIC1-2
Location (hg19): chr6:31708039-31708332
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 294 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000088039.1|FTMT22200002911.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -135.3077 non-coding 
CPAT coding probability 3.86% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CLIC1-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CLIC1-2:1
5.0 lnc-CLIC1-2:1
5.1 lnc-VWA7-3:1
5.2 lnc-CLIC1-2:1