Transcript: lnc-CLK1-1:7

Basic information

LNCipedia transcript ID: lnc-CLK1-1:7 
LNCipedia gene ID: lnc-CLK1-1
Location (hg19): chr2:201674364-201675555
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1192 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT076323
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -174.3692 non-coding 
CPAT coding probability 2.22% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CLK1-1:7 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CLK1-5:1
4.0 lnc-CLK1-5:1
4.1 lnc-CLK1-1:7
5.0 lnc-CLK1-1:7
5.1 lnc-HSPD1-49:7
5.2 lnc-CLK1-1:7