Transcript: lnc-CLK1-3:4

Basic information

LNCipedia transcript ID: lnc-CLK1-3:4 
LNCipedia gene ID: lnc-CLK1-3
Location (hg19): chr2:201725688-201729380
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 596 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT076338
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -338.0518 non-coding 
CPAT coding probability 40.51% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-CLK1-3:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CLK1-3:4
4.0 lnc-CLK1-3:4
4.1 lnc-CLK1-3:4
5.0 lnc-CLK1-3:4
5.1 lnc-HSPD1-50:3
5.2 lnc-CLK1-3:4