Transcript: lnc-CLN5-4:2

Basic information

LNCipedia transcript ID: lnc-CLN5-4:2 
LNCipedia gene ID: lnc-CLN5-4
Location (hg19): chr13:77601433-77603931
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2499 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000015359.1|ENCT00000114312.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -33.323 non-coding 
CPAT coding probability 12.19% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CLN5-4:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CLN5-3:3
5.0 lnc-CLN5-3:3
5.1 lnc-COL4A2-228:2
5.2 lnc-CLN5-4:2