Transcript: lnc-CLN8-7:1

Basic information

LNCipedia transcript ID: lnc-CLN8-7:1 
LNCipedia gene ID: lnc-CLN8-7
Location (hg19): chr8:1304795-1306100
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 911 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00014575; NONHSAT124656
Alternative gene names: XLOC_006685; linc-DLGAP2-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -56.6557 non-coding 
CPAT coding probability 18.50% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CLN8-7:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-DLGAP2-3:1
3.1 lnc-DLGAP2-3:1
4.0 lnc-DLGAP2-3:1
4.1 ERICH1-AS1:36
5.0 ERICH1-AS1:36
5.1 lnc-DEFB106A-111:36
5.2 lnc-CLN8-7:1