Transcript: lnc-CLN8-8:1

Basic information

LNCipedia transcript ID: lnc-CLN8-8:1 
LNCipedia gene ID: lnc-CLN8-8
Ensembl Gene ID: ENSG00000281961
Ensembl Transcript ID: ENST00000633198
Location (hg19): chr8:1326033-1328473
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 480 bp
Exons: 3
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000633198.1
Alternative gene names: ENSG00000281961.1; AF067845.3; AF067845.4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -53.2875 non-coding 
CPAT coding probability 3.38% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CLN8-8:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-DLGAP2-8:1
4.1 lnc-DLGAP2-8:1
5.0 lnc-DLGAP2-8:1
5.1 lnc-DEFB106A-104:1
5.2 lnc-CLN8-8:1