Transcript: lnc-CLUH-3:1

Basic information

LNCipedia transcript ID: lnc-CLUH-3:1 
LNCipedia gene ID: lnc-CLUH-3
Ensembl Gene ID: ENSG00000277200
Ensembl Transcript ID: ENST00000614400
Location (hg19): chr17:2624095-2627241
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3147 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000614400.1
Alternative gene names: ENSG00000277200.1; RP11-74E22.8; AC005696.4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -70.3206 non-coding 
CPAT coding probability 10.20% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CLUH-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-KIAA0664-3:2
4.1 lnc-KIAA0664-3:2
5.0 lnc-KIAA0664-3:2
5.1 lnc-RPH3AL-80:1
5.2 lnc-CLUH-3:1