Transcript: lnc-CLYBL-10:1

Basic information

LNCipedia transcript ID: lnc-CLYBL-10:1 
LNCipedia gene ID: lnc-CLYBL-10
Location (hg19): chr13:100150778-100153569
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 562 bp
Exons: 3
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017
Alternative transcript names: ENST00000627052.2
Alternative gene names: ENSG00000280710.2; RP11-214F16.8; AL139035.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -1081.5625 non-coding 
CPAT coding probability 3.24% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CLYBL-10:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-TM9SF2-10:1
4.1 lnc-TM9SF2-10:1
5.0 lnc-TM9SF2-10:1
5.1 lnc-COL4A2-86:1
5.2 lnc-CLYBL-10:1