Transcript: lnc-CMBL-4:1

Basic information

LNCipedia transcript ID: lnc-CMBL-4:1 
LNCipedia gene ID: lnc-CMBL-4
Ensembl Gene ID: ENSG00000271715
Ensembl Transcript ID: ENST00000607847
Location (hg19): chr5:10269601-10270030
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 430 bp
Exons: 1
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000607847.1
Alternative gene names: ENSG00000271715.1; CTD-2256P15.5; AC012640.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -49.9158 non-coding 
CPAT coding probability 3.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CMBL-4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CMBL-4:1
4.0 lnc-CMBL-4:1
4.1 lnc-CMBL-4:1
5.0 lnc-CMBL-4:1
5.1 lnc-IRX2-131:1
5.2 lnc-CMBL-4:1