Transcript: lnc-CMPK2-5:17

Basic information

LNCipedia transcript ID: lnc-CMPK2-5:17 
LNCipedia gene ID: lnc-CMPK2-5
Location (hg19): chr2:6778478-6790379
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 620 bp
Exons: 4
Sources: NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: NONHSAT068894; ENST00000585781.1
Alternative gene names: ENSG00000236172.2; hsa-mir-7515


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -338.1517 non-coding 
CPAT coding probability 0.38% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CMPK2-5:17 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CMPK2-5:17
4.0 lnc-CMPK2-5:17
4.1 lnc-CMPK2-5:17
5.0 lnc-CMPK2-5:17
5.1 lnc-RAD51AP2-155:29
5.2 lnc-CMPK2-5:17