Transcript: lnc-CMPK2-5:4

Basic information

LNCipedia transcript ID: lnc-CMPK2-5:4 
LNCipedia gene ID: lnc-CMPK2-5
Location (hg19): chr2:6786752-6827893
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2130 bp
Exons: 6
Sources: Nielsen et al.,2014
Alternative transcript names: ucscGeneNc_uc002qym_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -6.7809 non-coding 
CPAT coding probability 0.81% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CMPK2-5:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CMPK2-5:4
4.0 lnc-CMPK2-5:4
4.1 lnc-CMPK2-5:4
5.0 lnc-CMPK2-5:4
5.1 lnc-RAD51AP2-155:2
5.2 lnc-CMPK2-5:4