Transcript: lnc-CMPK2-5:61

Basic information

LNCipedia transcript ID: lnc-CMPK2-5:61 
LNCipedia gene ID: lnc-CMPK2-5
Location (hg19): chr2:6787654-6790704
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 667 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00005071; NONHSAT068902
Alternative gene names: XLOC_001964; linc-RNASEH1-13


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -96.58 non-coding 
CPAT coding probability 3.29% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CMPK2-5:61 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CMPK2-4:2
3.1 lnc-CMPK2-4:3
4.0 lnc-CMPK2-5:61
4.1 lnc-CMPK2-5:61
5.0 lnc-CMPK2-5:61
5.1 lnc-RAD51AP2-155:4
5.2 lnc-CMPK2-5:61