Transcript: lnc-CMPK2-5:63

Basic information

LNCipedia transcript ID: lnc-CMPK2-5:63 
LNCipedia gene ID: lnc-CMPK2-5
Location (hg19): chr2:6775745-6790655
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1452 bp
Exons: 7
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00004114; NONHSAT068884
Alternative gene names: XLOC_001964; linc-RNASEH1-13


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -96.58 non-coding 
CPAT coding probability 2.06% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CMPK2-5:63 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CMPK2-4:4
3.1 lnc-CMPK2-4:4
4.0 lnc-CMPK2-5:63
4.1 lnc-CMPK2-5:63
5.0 lnc-CMPK2-5:63
5.1 lnc-RAD51AP2-155:8
5.2 lnc-CMPK2-5:63