Transcript: lnc-CNBD1-4:19

Basic information

LNCipedia transcript ID: lnc-CNBD1-4:19 
LNCipedia gene ID: lnc-CNBD1-4
Location (hg19): chr8:89723724-89727163
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2280 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00014791; NONHSAT127603
Alternative gene names: XLOC_006867; linc-RIPK2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 3.6391 non-coding 
CPAT coding probability 4.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CNBD1-4:19 no no no no

Available literature

  1. Li (2015), Distinct expression profiles of lncRNAs between regressive and mature scars., Cell. Physiol. Biochem.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RIPK2-1:1
3.1 lnc-RIPK2-1:1
4.0 lnc-RIPK2-1:1
4.1 lnc-CNBD1-4:19
5.0 lnc-CNBD1-4:19
5.1 lnc-CA2-29:18
5.2 lnc-CNBD1-4:19