Transcript: lnc-CNNM1-1:4

Basic information

LNCipedia transcript ID: lnc-CNNM1-1:4 
LNCipedia gene ID: lnc-CNNM1-1
Location (hg19): chr10:101190693-101198199
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 7422 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000224934.2|MICT00000047033.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 18.4977 non-coding 
CPAT coding probability 1.27% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CNNM1-1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CNNM1-1:4
5.0 lnc-CNNM1-1:4
5.1 lnc-SMC3-165:3
5.2 lnc-CNNM1-1:4