Transcript: lnc-CNOT1-1:1

Basic information

LNCipedia transcript ID: lnc-CNOT1-1:1 
LNCipedia gene ID: lnc-CNOT1-1
Location (hg19): chr16:58535153-58547522
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3196 bp
Exons: 2
Sources: Biogazelle lncRNA chip
Alternative transcript names: ENST00000501095
Alternative gene names: ENSG00000246134


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 111.4865 coding 
CPAT coding probability 13.29% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-CNOT1-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CNOT1-1:1
3.1 lnc-CNOT1-1:1
4.0 lnc-CNOT1-1:1
4.1 lnc-CNOT1-1:1
5.0 lnc-CNOT1-1:1
5.1 lnc-CFAP20-14:1
5.2 lnc-CNOT1-1:1