Transcript: lnc-CNPY1-11:2

Basic information

LNCipedia transcript ID: lnc-CNPY1-11:2 
LNCipedia gene ID: lnc-CNPY1-11
Location (hg19): chr7:155056157-155059857
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3187 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00014019; NONHSAT124359
Alternative gene names: XLOC_006663; linc-PAXIP1-6


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -6.7897 non-coding 
CPAT coding probability 45.54% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-CNPY1-11:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AC099552.4.1-2:2
3.1 lnc-AC099552.4.1-2:2
4.0 lnc-AC099552.4.1-2:2
4.1 lnc-AC099552.4.1-2:2
5.0 lnc-AC099552.4.1-2:2
5.1 lnc-CNPY1-5:2
5.2 lnc-CNPY1-11:2