Transcript: lnc-CNPY1-2:30

Basic information

LNCipedia transcript ID: lnc-CNPY1-2:30 
LNCipedia gene ID: lnc-CNPY1-2
Ensembl Gene ID: ENSG00000216895
Ensembl Transcript ID: ENST00000401694
Location (hg19): chr7:155403925-155437095
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 512 bp
Exons: 3
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000401694.4
Alternative gene names: ENSG00000216895.8; AC009403.2; ENSG00000216895.9; AC009403.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -51.6553 non-coding 
CPAT coding probability 11.35% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CNPY1-2:30 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-AC009403.2.1-2:7
4.1 lnc-AC009403.2.1-2:7
5.0 lnc-AC009403.2.1-2:7
5.1 lnc-CNPY1-2:13
5.2 lnc-CNPY1-2:30