Transcript: lnc-CNPY1-2:34

Basic information

LNCipedia transcript ID: lnc-CNPY1-2:34 
LNCipedia gene ID: lnc-CNPY1-2
Ensembl Gene ID: ENSG00000283128
Ensembl Transcript ID: ENST00000637398
Location (hg19): chr7:155293993-155436880
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2744 bp
Exons: 8
Sources: Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000637398.1
Alternative gene names: ENSG00000283128.1; RP5-912I13.2; AC009403.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 1203.3168 coding 
CPAT coding probability 68.72% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-CNPY1-2:34 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-AC009403.2.1-2:12
5.0 lnc-AC009403.2.1-2:12
5.1 lnc-CNPY1-2:17
5.2 lnc-CNPY1-2:34