Transcript: lnc-CNTRL-2:2

Basic information

LNCipedia transcript ID: lnc-CNTRL-2:2 
LNCipedia gene ID: lnc-CNTRL-2
Location (hg19): chr9:123555791-123559050
Strand: +
Class: sense-overlapping
Sequence Ontology term: sense_overlap_ncRNA
Transcript size: 416 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00016681; NONHSAT134514
Alternative gene names: XLOC_007549; linc-CEP110-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -194.3261 non-coding 
CPAT coding probability 0.91% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CNTRL-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CNTRL-2:2
3.1 lnc-CNTRL-2:2
4.0 lnc-CNTRL-2:2
4.1 lnc-CNTRL-2:2
5.0 lnc-CNTRL-2:2
5.1 lnc-DAB2IP-18:2
5.2 lnc-CNTRL-2:2