Transcript: lnc-COA6-11:2

Basic information

LNCipedia transcript ID: lnc-COA6-11:2 
LNCipedia gene ID: lnc-COA6-11
Location (hg19): chr1:234667083-234667685
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 603 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000039741.1|FTMT20400011767.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -254.7695 non-coding 
CPAT coding probability 1.89% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-COA6-11:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-C1orf31-11:2
5.0 lnc-C1orf31-11:2
5.1 lnc-KCNK1-16:2
5.2 lnc-COA6-11:2