Transcript: lnc-COA6-9:1

Basic information

LNCipedia transcript ID: lnc-COA6-9:1 
LNCipedia gene ID: lnc-COA6-9
Ensembl Gene ID: ENSG00000273367
Ensembl Transcript ID: ENST00000610233
Location (hg19): chr1:234507932-234508557
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 626 bp
Exons: 1
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000610233.1
Alternative gene names: ENSG00000273367.1; RP5-827C21.6; AL355472.4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -116.6169 non-coding 
CPAT coding probability 0.21% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-COA6-9:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C1orf31-9:1
4.0 lnc-C1orf31-9:1
4.1 lnc-C1orf31-9:1
5.0 lnc-C1orf31-9:1
5.1 lnc-KCNK1-11:1
5.2 lnc-COA6-9:1