Transcript: lnc-COG5-2:3

Basic information

LNCipedia transcript ID: lnc-COG5-2:3 
LNCipedia gene ID: lnc-COG5-2
Ensembl Gene ID: ENSG00000243193
Ensembl Transcript ID: ENST00000629022
Location (hg19): chr7:106722284-106774109
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 363 bp
Exons: 3
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000629022.2
Alternative gene names: ENSG00000243193.4; CTA-360L10.1; AC006387.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -495.2523 non-coding 
CPAT coding probability 0.10% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-COG5-2:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-COG5-2:3
4.1 lnc-COG5-2:3
5.0 lnc-COG5-2:3
5.1 lnc-NRCAM-19:2
5.2 lnc-COG5-2:3