Transcript: lnc-COG5-4:2

Basic information

LNCipedia transcript ID: lnc-COG5-4:2 
LNCipedia gene ID: lnc-COG5-4
Location (hg19): chr7:107165717-107220594
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 916 bp
Exons: 7
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000272854.1|HBMT00001345799.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -105.6951 non-coding 
CPAT coding probability 6.41% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-COG5-4:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-COG5-4:2
5.0 lnc-COG5-4:2
5.1 lnc-NRCAM-15:1
5.2 lnc-COG5-4:2