Transcript: lnc-COG6-4:1

Basic information

LNCipedia transcript ID: lnc-COG6-4:1 
LNCipedia gene ID: lnc-COG6-4
Location (hg19): chr13:39953253-39956328
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2219 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: l_815_chr13:39953252-39956328_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 11.9608 non-coding 
CPAT coding probability 1.42% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-COG6-4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-COG6-4:1
4.0 lnc-COG6-4:1
4.1 lnc-COG6-4:1
5.0 lnc-COG6-4:1
5.1 lnc-KL-52:1
5.2 lnc-COG6-4:1