Transcript: lnc-COMMD10-10:4

Basic information

LNCipedia transcript ID: lnc-COMMD10-10:4 
LNCipedia gene ID: lnc-COMMD10-10
Location (hg19): chr5:116100130-116169941
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2340 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000077150.1|ENCT00000348821.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -92.2586 non-coding 
CPAT coding probability 0.53% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-COMMD10-10:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-COMMD10-10:4
5.0 lnc-COMMD10-10:4
5.1 lnc-AP3S1-27:3
5.2 lnc-COMMD10-10:4