Transcript: lnc-COMMD3-7:6

Basic information

LNCipedia transcript ID: lnc-COMMD3-7:6 
LNCipedia gene ID: lnc-COMMD3-7
Location (hg19): chr10:21815049-21816200
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1152 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000108226.1|ENCT00000044233.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -67.6476 non-coding 
CPAT coding probability 2.75% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-COMMD3-7:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-MLLT10-7:1
5.0 lnc-MLLT10-7:1
5.1 lnc-NPY4R2-298:1
5.2 lnc-COMMD3-7:6