Transcript: lnc-COPS7A-3:1

Basic information

LNCipedia transcript ID: lnc-COPS7A-3:1 
LNCipedia gene ID: lnc-COPS7A-3
Ensembl Gene ID: ENSG00000269892
Ensembl Transcript ID: ENST00000602431
Location (hg19): chr12:6852151-6852807
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 657 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT026136; ENST00000602431.1
Alternative gene names: ENSG00000269892.1; RP4-761J14.10; AC125494.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -60.4853 non-coding 
CPAT coding probability 0.67% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-COPS7A-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-COPS7A-3:1
4.0 lnc-COPS7A-3:1
4.1 lnc-COPS7A-3:1
5.0 lnc-COPS7A-3:1
5.1 lnc-CLEC4D-50:1
5.2 lnc-COPS7A-3:1