Transcript: lnc-COPS8-18:4

Basic information

LNCipedia transcript ID: lnc-COPS8-18:4 
LNCipedia gene ID: lnc-COPS8-18
Location (hg19): chr2:237796337-237822872
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 5247 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000047181.1|MICT00000210388.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -8.0439 non-coding 
CPAT coding probability 13.99% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-COPS8-18:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-COPS8-3:4
5.0 lnc-COPS8-3:4
5.1 lnc-COPS8-7:4
5.2 lnc-COPS8-18:4