Transcript: lnc-COPS8-3:6

Basic information

LNCipedia transcript ID: lnc-COPS8-3:6 
LNCipedia gene ID: lnc-COPS8-3
Location (hg19): chr2:238121308-238121926
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 303 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00004060; NONHSAT077629
Alternative gene names: XLOC_001908; linc-MLPH-4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -10.8006 non-coding 
CPAT coding probability 0.37% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-COPS8-3:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AC112715.2.1-3:1
3.1 lnc-AC112715.2.1-3:1
4.0 lnc-AC112715.2.1-3:1
4.1 lnc-AC112715.2.1-3:1
5.0 lnc-AC112715.2.1-3:1
5.1 lnc-COPS8-3:5
5.2 lnc-COPS8-3:6