Transcript: lnc-COX18-2:1

Basic information

LNCipedia transcript ID: lnc-COX18-2:1 
LNCipedia gene ID: lnc-COX18-2
Location (hg19): chr4:73918079-73918634
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 556 bp
Exons: 1
Sources: Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000608631.1
Alternative gene names: ENSG00000272859.1; RP11-352E8.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -167.2514 non-coding 
CPAT coding probability 0.21% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-COX18-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-COX18-2:1
4.0 lnc-COX18-2:1
4.1 lnc-COX18-2:1
5.0 lnc-COX18-2:1
5.1 lnc-CXCL11-43:1
5.2 lnc-COX18-2:1