Transcript: lnc-CPEB2-7:1

Basic information

LNCipedia transcript ID: lnc-CPEB2-7:1 
LNCipedia gene ID: lnc-CPEB2-7
Location (hg19): chr4:13492921-13520604
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 491 bp
Exons: 4
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00007998; NONHSAT095572
Alternative gene names: XLOC_003461; linc-CPEB2-6


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -76.3927 non-coding 
CPAT coding probability 3.23% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CPEB2-7:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CPEB2-6:1
3.1 lnc-CPEB2-7:1
4.0 lnc-CPEB2-7:1
4.1 lnc-CPEB2-7:1
5.0 lnc-CPEB2-7:1
5.1 lnc-USP17L28-35:1
5.2 lnc-CPEB2-7:1