Transcript: lnc-CPLX1-8:2

Basic information

LNCipedia transcript ID: lnc-CPLX1-8:2 
LNCipedia gene ID: lnc-CPLX1-8
Ensembl Gene ID: ENSG00000272588
Ensembl Transcript ID: ENST00000607877
Location (hg19): chr4:750810-751528
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 719 bp
Exons: 1
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000607877.1
Alternative gene names: ENSG00000272588.1; RP11-440L14.4; AC139887.4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -16.2712 non-coding 
CPAT coding probability 40.60% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-CPLX1-8:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CPLX1-8:2
4.0 lnc-CPLX1-8:2
4.1 lnc-CPLX1-8:2
5.0 lnc-CPLX1-8:2
5.1 lnc-PSAPL1-107:2
5.2 lnc-CPLX1-8:2