Transcript: lnc-CPM-2:3

Basic information

LNCipedia transcript ID: lnc-CPM-2:3 
LNCipedia gene ID: lnc-CPM-2
Location (hg19): chr12:69068151-69080639
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3050 bp
Exons: 4
Sources: Biogazelle lncRNA chip
Alternative transcript names: ENST00000500695
Alternative gene names: ENSG00000247363


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -89.9779 non-coding 
CPAT coding probability 0.06% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CPM-2:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CPM-1:3
3.1 lnc-CPM-2:3
4.0 lnc-CPM-2:3
4.1 lnc-CPM-2:3
5.0 lnc-CPM-2:3
5.1 lnc-CPM-2:3
5.2 lnc-CPM-2:3