Transcript: lnc-CPM-2:6

Basic information

LNCipedia transcript ID: lnc-CPM-2:6 
LNCipedia gene ID: lnc-CPM-2
Location (hg19): chr12:69079658-69080970
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 633 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT029326
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -89.9779 non-coding 
CPAT coding probability 10.57% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CPM-2:6 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CPM-2:6
4.0 lnc-CPM-2:6
4.1 lnc-CPM-2:6
5.0 lnc-CPM-2:6
5.1 lnc-CPM-2:6
5.2 lnc-CPM-2:6