Transcript: lnc-CPM-2:7

Basic information

LNCipedia transcript ID: lnc-CPM-2:7 
LNCipedia gene ID: lnc-CPM-2
RefSeq ID: NR_038930
Location (hg19): chr12:69068151-69080639
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1729 bp
Exons: 3
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT029322; NR_038930; NR_038930.1
Alternative gene names: LOC100507250


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -89.9779 non-coding 
CPAT coding probability 0.07% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CPM-2:7 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CPM-2:7
4.0 lnc-CPM-2:7
4.1 lnc-CPM-2:7
5.0 lnc-CPM-2:7
5.1 lnc-CPM-2:7
5.2 lnc-CPM-2:7