Transcript: lnc-CPN2-4:16

Basic information

LNCipedia transcript ID: lnc-CPN2-4:16 
LNCipedia gene ID: lnc-CPN2-4
Location (hg19): chr3:193766710-193775587
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 841 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT094051
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -257.8071 non-coding 
CPAT coding probability 2.84% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CPN2-4:16 no no no no

Available literature

  1. Di Salvo (2015), Right ventricular long noncoding RNA expression in human heart failure., Pulm Circ


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CPN2-4:16
4.0 lnc-CPN2-4:16
4.1 lnc-CPN2-4:16
5.0 lnc-CPN2-4:16
5.1 lnc-LRRC15-5:39
5.2 lnc-CPN2-4:16