Transcript: lnc-CPN2-4:8

Basic information

LNCipedia transcript ID: lnc-CPN2-4:8 
LNCipedia gene ID: lnc-CPN2-4
Location (hg19): chr3:193775426-193783217
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 741 bp
Exons: 4
Sources: Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000609933.1
Alternative gene names: ENSG00000230102.3; RP11-407B7.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -44.4733 non-coding 
CPAT coding probability 16.05% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CPN2-4:8 no no no no

Available literature

  1. Di Salvo (2015), Right ventricular long noncoding RNA expression in human heart failure., Pulm Circ


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CPN2-4:8
4.0 lnc-CPN2-4:8
4.1 lnc-CPN2-4:8
5.0 lnc-CPN2-4:8
5.1 lnc-LRRC15-5:14
5.2 lnc-CPN2-4:8