Transcript: lnc-CPOX-3:3

Basic information

LNCipedia transcript ID: lnc-CPOX-3:3 
LNCipedia gene ID: lnc-CPOX-3
Location (hg19): chr3:98544178-98614256
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 582 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT090829
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -139.8062 non-coding 
CPAT coding probability 80.59% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-CPOX-3:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CPOX-3:3
4.0 lnc-CPOX-3:3
4.1 lnc-CPOX-3:3
5.0 lnc-CPOX-3:3
5.1 lnc-GABRR3-12:3
5.2 lnc-CPOX-3:3