Transcript: lnc-CPVL-1:2

Basic information

LNCipedia transcript ID: lnc-CPVL-1:2 
LNCipedia gene ID: lnc-CPVL-1
RefSeq ID: NR_120522
Location (hg19): chr7:29238656-29248586
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1298 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_120522; NR_120522.1
Alternative gene names: LOC102724484


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -167.1178 non-coding 
CPAT coding probability 8.57% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CPVL-1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CPVL-1:2
4.0 lnc-CPVL-1:2
4.1 lnc-CPVL-1:2
5.0 lnc-CPVL-1:2
5.1 lnc-HOXA7-21:2
5.2 lnc-CPVL-1:2