Transcript: lnc-CPVL-4:11

Basic information

LNCipedia transcript ID: lnc-CPVL-4:11 
LNCipedia gene ID: lnc-CPVL-4
Location (hg19): chr7:29549791-29603307
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1058 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000223813.2|MICT00000320800.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -127.9799 non-coding 
CPAT coding probability 2.00% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CPVL-4:11 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CPVL-4:11
5.0 lnc-CPVL-4:11
5.1 lnc-PDE1C-26:4
5.2 lnc-CPVL-4:11