Transcript: lnc-CPVL-4:12

Basic information

LNCipedia transcript ID: lnc-CPVL-4:12 
LNCipedia gene ID: lnc-CPVL-4
Location (hg19): chr7:29550323-29603307
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2906 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000223813.2|ENCT00000410441.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -73.9884 non-coding 
CPAT coding probability 1.79% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CPVL-4:12 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CPVL-4:12
5.0 lnc-CPVL-4:12
5.1 lnc-PDE1C-26:5
5.2 lnc-CPVL-4:12