Transcript: lnc-CPVL-4:5

Basic information

LNCipedia transcript ID: lnc-CPVL-4:5 
LNCipedia gene ID: lnc-CPVL-4
Location (hg19): chr7:29549804-29603386
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1468 bp
Exons: 6
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA1821:2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -127.9799 non-coding 
CPAT coding probability 5.85% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CPVL-4:5 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-CPVL-4:5
4.1 lnc-CPVL-4:5
5.0 lnc-CPVL-4:5
5.1 lnc-PDE1C-26:1
5.2 lnc-CPVL-4:5