Transcript: lnc-CRACR2A-3:5

Basic information

LNCipedia transcript ID: lnc-CRACR2A-3:5 
LNCipedia gene ID: lnc-CRACR2A-3
Location (hg19): chr12:3454951-3475270
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 245 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000250770.2|ENCT00000098112.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -82.7238 non-coding 
CPAT coding probability 1.54% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CRACR2A-3:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-EFCAB4B-8:5
5.0 lnc-EFCAB4B-8:5
5.1 lnc-CHD4-91:5
5.2 lnc-CRACR2A-3:5