Transcript: lnc-CREB3L4-12:3

Basic information

LNCipedia transcript ID: lnc-CREB3L4-12:3 
LNCipedia gene ID: lnc-CREB3L4-12
Ensembl Gene ID: ENSG00000282386
Ensembl Transcript ID: ENST00000633140
Location (hg19): chr1:153936837-153937546
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 710 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000633140.1
Alternative gene names: ENSG00000282386.1; RP11-422P24.12; AL358472.4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -85.33 non-coding 
CPAT coding probability 1.18% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CREB3L4-12:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-CREB3L4-6:1
4.1 lnc-CREB3L4-3:4
5.0 lnc-CREB3L4-3:4
5.1 lnc-CREB3L4-8:3
5.2 lnc-CREB3L4-12:3