Transcript: lnc-CREG1-1:1

Basic information

LNCipedia transcript ID: lnc-CREG1-1:1 
LNCipedia gene ID: lnc-CREG1-1
Location (hg19): chr1:167498603-167502878
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1269 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00001714; NONHSAT007395
Alternative gene names: XLOC_001081; linc-CD247


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -93.7529 non-coding 
CPAT coding probability 0.55% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CREG1-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CREG1-1:1
3.1 lnc-CREG1-1:1
4.0 lnc-CREG1-1:1
4.1 lnc-CREG1-1:1
5.0 lnc-CREG1-1:1
5.1 lnc-SH2D1B-64:2
5.2 lnc-CREG1-1:1