Transcript: lnc-CRELD1-4:1

Basic information

LNCipedia transcript ID: lnc-CRELD1-4:1 
LNCipedia gene ID: lnc-CRELD1-4
Ensembl Gene ID: ENSG00000269982
Ensembl Transcript ID: ENST00000602436
Location (hg19): chr3:10000401-10004223
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3823 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT087851; ENST00000602436.1
Alternative gene names: ENSG00000269982.1; RP11-1020A11.2; ; AC018809.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -1.9384 non-coding 
CPAT coding probability 1.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CRELD1-4:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CRELD1-2:1
4.0 lnc-CRELD1-3:1
4.1 PRRT3-AS1:7
5.0 PRRT3-AS1:7
5.1 lnc-BRK1-26:1
5.2 lnc-CRELD1-4:1