Transcript: lnc-CRYAA2-15:1

Basic information

LNCipedia transcript ID: lnc-CRYAA2-15:1 
LNCipedia gene ID: lnc-CRYAA2-15
Ensembl Gene ID: ENSG00000278955
Ensembl Transcript ID: ENST00000624937
Location (hg19): chr21:15095878-15134632
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 553 bp
Exons: 3
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000624937.1
Alternative gene names: ENSG00000278955.1; CH507-210P18.4; ENSG00000278955.2; MIR8069-1; ENSG00000278955.3; FP475955.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 29.4747 non-coding 
CPAT coding probability 28.07% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CRYAA2-15:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-POTED-15:1
4.1 lnc-POTED-15:1
5.0 lnc-POTED-15:1
5.1 lnc-OLIG1-184:1
5.2 lnc-CRYAA2-15:1