Transcript: lnc-CRYBB1-4:3

Basic information

LNCipedia transcript ID: lnc-CRYBB1-4:3 
LNCipedia gene ID: lnc-CRYBB1-4
Location (hg19): chr22:27505474-27509252
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2578 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000058351.1|MICT00000231494.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -0.7549 non-coding 
CPAT coding probability 3.74% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CRYBB1-4:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CRYBB1-4:3
5.0 lnc-CRYBB1-4:3
5.1 lnc-PITPNB-16:2
5.2 lnc-CRYBB1-4:3