Transcript: lnc-CSGALNACT2-2:2

Basic information

LNCipedia transcript ID: lnc-CSGALNACT2-2:2 
LNCipedia gene ID: lnc-CSGALNACT2-2
Location (hg19): chr10:43727898-43729690
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 513 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT012946
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -187.3049 non-coding 
CPAT coding probability 8.66% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CSGALNACT2-2:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CSGALNACT2-2:2
4.0 lnc-CSGALNACT2-2:2
4.1 lnc-CSGALNACT2-2:2
5.0 lnc-CSGALNACT2-2:2
5.1 lnc-NPY4R2-564:1
5.2 lnc-CSGALNACT2-2:2